STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVPS13_C domain-containing protein. (4027 aa)    
Predicted Functional Partners:
GAK
Uncharacterized protein.
    
 
 0.648
DNAJC6
Uncharacterized protein.
    
 
 0.547
ZNF462
Uncharacterized protein.
      
 0.522
DV515_00010776
Phosphoglycerate kinase.
      
 0.520
RAD23B
Uncharacterized protein.
      
 0.508
COASY
Uncharacterized protein.
      
 0.459
EXOC2
Exocyst complex component 2.
   
  
 0.440
VPS45
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.440
VPS35
Uncharacterized protein.
   
 
 0.432
SPG11
Spatacsin_C domain-containing protein.
   
  
 0.431
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.