STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCFD1Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (632 aa)    
Predicted Functional Partners:
DV515_00001529
t-SNARE coiled-coil homology domain-containing protein.
   
 0.999
DV515_00014186
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.998
DV515_00016566
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.998
STX5
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.997
NSF
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.993
GOSR1
Uncharacterized protein.
    
 
 0.988
DV515_00011992
t-SNARE coiled-coil homology domain-containing protein.
   
 0.966
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene).
   
 0.965
STX18
Uncharacterized protein.
    
 
 0.957
NAPB
Uncharacterized protein.
    
 0.954
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.