STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF4RING-type domain-containing protein. (193 aa)    
Predicted Functional Partners:
DV515_00004586
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.930
DV515_00004256
Ubiquitin-like domain-containing protein.
    
  0.871
UBA52
Ubiquitin-like domain-containing protein.
    
  0.871
KXD1
KxDL domain-containing protein.
    
   0.859
SUMO1
Small ubiquitin-related modifier.
   
 
 0.819
DV515_00009940
Ubiquitin-like domain-containing protein.
   
 
 0.793
ENSEGOP00005023688
annotation not available
   
 
 0.793
DV515_00012350
Uncharacterized protein.
    
  0.741
ENSEGOP00005022707
annotation not available
    
  0.692
UBE2V2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.682
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.