STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIMIF rod domain-containing protein; Belongs to the intermediate filament family. (589 aa)    
Predicted Functional Partners:
ENSEGOP00005012031
annotation not available
   
 0.536
ENSEGOP00005021883
annotation not available
   
 0.536
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
    
   0.514
DV515_00015303
Uncharacterized protein.
    
 
0.512
EEF1A1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
     
 0.484
EEF1A2
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
     
 0.484
RBM39
RNA binding motif protein 39.
    
 0.476
LEMD3
LEM domain-containing protein.
    
 0.476
DV515_00014297
Uncharacterized protein.
   
  
 0.468
UBAC1
Uncharacterized protein.
      
 0.456
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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