STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KBTBD2BTB domain-containing protein. (623 aa)    
Predicted Functional Partners:
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.522
TMEM47
Uncharacterized protein.
      
 0.513
AVL9
UDENN domain-containing protein.
      
 0.508
BBS9
Bardet-Biedl syndrome 9.
    
 0.494
MIB2
RING-type domain-containing protein.
    
 0.470
UBXN7
UBX domain protein 7.
    
  0.470
DCAF6
WD_REPEATS_REGION domain-containing protein.
      
 0.451
ANAPC13
Anaphase promoting complex subunit 13.
      
 0.451
ZCRB1
RRM domain-containing protein.
      
 0.450
IPO13
Importin N-terminal domain-containing protein.
      
 0.449
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.