STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3D19Uncharacterized protein. (1036 aa)    
Predicted Functional Partners:
CLINT1
ENTH domain-containing protein.
     
 0.660
SH3YL1
Ysc84 domain-containing protein.
   
  
0.637
VTA1
Vesicle trafficking 1.
    
   0.580
GCH1
GTP_cyclohydroI domain-containing protein.
    
   0.580
GAK
Uncharacterized protein.
     
 0.559
DV515_00017237
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
   
 
 0.507
SH3PXD2B
Uncharacterized protein.
   
 0.485
NCF4
Uncharacterized protein.
   
0.485
DV515_00011283
Uncharacterized protein.
   
 0.485
ENSEGOP00005015697
annotation not available
   
 0.485
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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