STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METAP1Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (387 aa)    
Predicted Functional Partners:
RPL35
Uncharacterized protein.
  
 
 0.979
RPL5
Ribosomal_L18_c domain-containing protein.
  
 
 0.977
RPL23
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.973
METAP2
Uncharacterized protein.
    
 0.972
RPL23A
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.968
DV515_00006640
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.963
RPL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.954
ENSEGOP00005022528
annotation not available
  
 
 0.950
RPS11
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.935
DV515_00006744
KOW domain-containing protein.
  
   0.906
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.