STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND1BUDENN domain-containing protein. (787 aa)    
Predicted Functional Partners:
RAB35
Uncharacterized protein.
    
 0.972
IFT27
Uncharacterized protein.
    
 0.691
DENND1A
Uncharacterized protein.
     
0.640
SUOX
Cytochrome b5 heme-binding domain-containing protein.
      
 0.621
DV515_00007236
Uncharacterized protein.
   
 
  0.573
RAB28
Uncharacterized protein.
     
 0.560
RAB21
Uncharacterized protein.
      
 0.523
TBC1D20
Rab-GAP TBC domain-containing protein.
      
 0.519
ITSN2
Uncharacterized protein.
    
 
 0.478
RAB22A
Uncharacterized protein.
      
 0.461
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.