Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAMP | LSG1 | ENSEGOP00005006488 | ENSEGOP00005017680 | WD_REPEATS_REGION domain-containing protein. | CP-type G domain-containing protein. | 0.609 |
AAMP | MRPL16 | ENSEGOP00005006488 | ENSEGOP00005019095 | WD_REPEATS_REGION domain-containing protein. | Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. | 0.884 |
AAMP | MRTO4 | ENSEGOP00005006488 | ENSEGOP00005018991 | WD_REPEATS_REGION domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.671 |
AAMP | NMD3 | ENSEGOP00005006488 | ENSEGOP00005017264 | WD_REPEATS_REGION domain-containing protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.679 |
AAMP | NOD1 | ENSEGOP00005006488 | ENSEGOP00005003449 | WD_REPEATS_REGION domain-containing protein. | Nucleotide binding oligomerization domain containing 1. | 0.683 |
AAMP | SIL1 | ENSEGOP00005006488 | ENSEGOP00005015437 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.884 |
AAMP | TBL3 | ENSEGOP00005006488 | ENSEGOP00005016138 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.644 |
AAMP | TBXA2R | ENSEGOP00005006488 | ENSEGOP00005011032 | WD_REPEATS_REGION domain-containing protein. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.748 |
AAMP | UTP18 | ENSEGOP00005006488 | ENSEGOP00005009614 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.612 |
AAMP | WDR12 | ENSEGOP00005006488 | ENSEGOP00005013716 | WD_REPEATS_REGION domain-containing protein. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.622 |
LSG1 | AAMP | ENSEGOP00005017680 | ENSEGOP00005006488 | CP-type G domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.609 |
LSG1 | MRPL16 | ENSEGOP00005017680 | ENSEGOP00005019095 | CP-type G domain-containing protein. | Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. | 0.446 |
LSG1 | MRTO4 | ENSEGOP00005017680 | ENSEGOP00005018991 | CP-type G domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.859 |
LSG1 | NMD3 | ENSEGOP00005017680 | ENSEGOP00005017264 | CP-type G domain-containing protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.991 |
LSG1 | SIL1 | ENSEGOP00005017680 | ENSEGOP00005015437 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.446 |
LSG1 | TBL3 | ENSEGOP00005017680 | ENSEGOP00005016138 | CP-type G domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.825 |
LSG1 | UTP18 | ENSEGOP00005017680 | ENSEGOP00005009614 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.466 |
LSG1 | WDR12 | ENSEGOP00005017680 | ENSEGOP00005013716 | CP-type G domain-containing protein. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.922 |
MRPL16 | AAMP | ENSEGOP00005019095 | ENSEGOP00005006488 | Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. | WD_REPEATS_REGION domain-containing protein. | 0.884 |
MRPL16 | LSG1 | ENSEGOP00005019095 | ENSEGOP00005017680 | Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. | CP-type G domain-containing protein. | 0.446 |
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