SNX4 protein (Erythrura gouldiae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SNX4

PX domain-containing protein. (442 aa)

Predicted Functional Partners:

SNX7

0.948

GAK

0.948

SNX30

0.948

VPS35

0.800

VPS29

0.786

VPS26B

0.759

SNX6

0.721

SNX5

0.721

VPS26A

0.682

SNX1

0.682

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAK	SNX1	ENSEGOP00005012092	ENSEGOP00005023224	Uncharacterized protein.	PX domain-containing protein.	0.948
GAK	SNX30	ENSEGOP00005012092	ENSEGOP00005020556	Uncharacterized protein.	Sorting nexin family member 30.	0.948
GAK	SNX4	ENSEGOP00005012092	ENSEGOP00005007283	Uncharacterized protein.	PX domain-containing protein.	0.948
GAK	SNX7	ENSEGOP00005012092	ENSEGOP00005005321	Uncharacterized protein.	PX domain-containing protein.	0.948
GAK	VPS29	ENSEGOP00005012092	ENSEGOP00005015443	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.514
GAK	VPS35	ENSEGOP00005012092	ENSEGOP00005017173	Uncharacterized protein.	Uncharacterized protein.	0.672
SNX1	GAK	ENSEGOP00005023224	ENSEGOP00005012092	PX domain-containing protein.	Uncharacterized protein.	0.948
SNX1	SNX4	ENSEGOP00005023224	ENSEGOP00005007283	PX domain-containing protein.	PX domain-containing protein.	0.682
SNX1	SNX5	ENSEGOP00005023224	ENSEGOP00005003853	PX domain-containing protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.937
SNX1	SNX6	ENSEGOP00005023224	ENSEGOP00005000918	PX domain-containing protein.	PX domain-containing protein.	0.907
SNX1	VPS26A	ENSEGOP00005023224	ENSEGOP00005018913	PX domain-containing protein.	Uncharacterized protein.	0.898
SNX1	VPS26B	ENSEGOP00005023224	ENSEGOP00005010783	PX domain-containing protein.	Uncharacterized protein.	0.863
SNX1	VPS29	ENSEGOP00005023224	ENSEGOP00005015443	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.964
SNX1	VPS35	ENSEGOP00005023224	ENSEGOP00005017173	PX domain-containing protein.	Uncharacterized protein.	0.966
SNX30	GAK	ENSEGOP00005020556	ENSEGOP00005012092	Sorting nexin family member 30.	Uncharacterized protein.	0.948
SNX30	SNX4	ENSEGOP00005020556	ENSEGOP00005007283	Sorting nexin family member 30.	PX domain-containing protein.	0.948
SNX30	SNX5	ENSEGOP00005020556	ENSEGOP00005003853	Sorting nexin family member 30.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.673
SNX30	SNX6	ENSEGOP00005020556	ENSEGOP00005000918	Sorting nexin family member 30.	PX domain-containing protein.	0.673
SNX30	VPS26A	ENSEGOP00005020556	ENSEGOP00005018913	Sorting nexin family member 30.	Uncharacterized protein.	0.651
SNX30	VPS26B	ENSEGOP00005020556	ENSEGOP00005010783	Sorting nexin family member 30.	Uncharacterized protein.	0.651