Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DV515_00000336 | RNF166 | ENSEGOP00005000414 | ENSEGOP00005012549 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | RING-type domain-containing protein. | 0.600 |
DV515_00000336 | UBA3 | ENSEGOP00005000414 | ENSEGOP00005007129 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | E2_bind domain-containing protein. | 0.728 |
DV515_00014850 | KLHL20 | ENSEGOP00005016608 | ENSEGOP00005006252 | Coronin; Belongs to the WD repeat coronin family. | Kelch like family member 20. | 0.607 |
DV515_00014850 | KLHL28 | ENSEGOP00005016608 | ENSEGOP00005009451 | Coronin; Belongs to the WD repeat coronin family. | BTB domain-containing protein. | 0.549 |
DV515_00014850 | RNF166 | ENSEGOP00005016608 | ENSEGOP00005012549 | Coronin; Belongs to the WD repeat coronin family. | RING-type domain-containing protein. | 0.525 |
KLHL20 | DV515_00014850 | ENSEGOP00005006252 | ENSEGOP00005016608 | Kelch like family member 20. | Coronin; Belongs to the WD repeat coronin family. | 0.607 |
KLHL20 | RNF166 | ENSEGOP00005006252 | ENSEGOP00005012549 | Kelch like family member 20. | RING-type domain-containing protein. | 0.462 |
KLHL28 | DV515_00014850 | ENSEGOP00005009451 | ENSEGOP00005016608 | BTB domain-containing protein. | Coronin; Belongs to the WD repeat coronin family. | 0.549 |
KLHL28 | RNF166 | ENSEGOP00005009451 | ENSEGOP00005012549 | BTB domain-containing protein. | RING-type domain-containing protein. | 0.625 |
LRSAM1 | RNF166 | ENSEGOP00005011346 | ENSEGOP00005012549 | Uncharacterized protein. | RING-type domain-containing protein. | 0.523 |
MED13L | RNF166 | ENSEGOP00005005882 | ENSEGOP00005012549 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RING-type domain-containing protein. | 0.521 |
RNF166 | DV515_00000336 | ENSEGOP00005012549 | ENSEGOP00005000414 | RING-type domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.600 |
RNF166 | DV515_00014850 | ENSEGOP00005012549 | ENSEGOP00005016608 | RING-type domain-containing protein. | Coronin; Belongs to the WD repeat coronin family. | 0.525 |
RNF166 | KLHL20 | ENSEGOP00005012549 | ENSEGOP00005006252 | RING-type domain-containing protein. | Kelch like family member 20. | 0.462 |
RNF166 | KLHL28 | ENSEGOP00005012549 | ENSEGOP00005009451 | RING-type domain-containing protein. | BTB domain-containing protein. | 0.625 |
RNF166 | LRSAM1 | ENSEGOP00005012549 | ENSEGOP00005011346 | RING-type domain-containing protein. | Uncharacterized protein. | 0.523 |
RNF166 | MED13L | ENSEGOP00005012549 | ENSEGOP00005005882 | RING-type domain-containing protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.521 |
RNF166 | UBA3 | ENSEGOP00005012549 | ENSEGOP00005007129 | RING-type domain-containing protein. | E2_bind domain-containing protein. | 0.489 |
RNF166 | ZBTB39 | ENSEGOP00005012549 | ENSEGOP00005016185 | RING-type domain-containing protein. | Uncharacterized protein. | 0.537 |
RNF166 | ZC3HC1 | ENSEGOP00005012549 | ENSEGOP00005011594 | RING-type domain-containing protein. | Uncharacterized protein. | 0.518 |
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