Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN1 | RBFOX2 | ENSEGOP00005008821 | ENSEGOP00005013252 | AXH domain-containing protein. | RNA binding fox-1 homolog 2. | 0.512 |
DV515_00006887 | HNRNPA2B1 | ENSEGOP00005014937 | ENSEGOP00005003331 | Uncharacterized protein. | Uncharacterized protein. | 0.783 |
DV515_00006887 | RBFOX2 | ENSEGOP00005014937 | ENSEGOP00005013252 | Uncharacterized protein. | RNA binding fox-1 homolog 2. | 0.563 |
ELAVL1 | HNRNPA2B1 | ENSEGOP00005010880 | ENSEGOP00005003331 | ELAV-like protein; Belongs to the RRM elav family. | Uncharacterized protein. | 0.664 |
ELAVL1 | RBFOX2 | ENSEGOP00005010880 | ENSEGOP00005013252 | ELAV-like protein; Belongs to the RRM elav family. | RNA binding fox-1 homolog 2. | 0.501 |
ELAVL1 | RBM24 | ENSEGOP00005010880 | ENSEGOP00005008818 | ELAV-like protein; Belongs to the RRM elav family. | RRM domain-containing protein. | 0.534 |
ELAVL1 | RBM38 | ENSEGOP00005010880 | ENSEGOP00005022979 | ELAV-like protein; Belongs to the RRM elav family. | Uncharacterized protein. | 0.547 |
HNRNPA2B1 | DV515_00006887 | ENSEGOP00005003331 | ENSEGOP00005014937 | Uncharacterized protein. | Uncharacterized protein. | 0.783 |
HNRNPA2B1 | ELAVL1 | ENSEGOP00005003331 | ENSEGOP00005010880 | Uncharacterized protein. | ELAV-like protein; Belongs to the RRM elav family. | 0.664 |
HNRNPA2B1 | RBFOX2 | ENSEGOP00005003331 | ENSEGOP00005013252 | Uncharacterized protein. | RNA binding fox-1 homolog 2. | 0.510 |
HNRNPA2B1 | SNRPC | ENSEGOP00005003331 | ENSEGOP00005022186 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.588 |
QKI | RBFOX2 | ENSEGOP00005010472 | ENSEGOP00005013252 | QKI, KH domain containing RNA binding. | RNA binding fox-1 homolog 2. | 0.762 |
QKI | RBPMS | ENSEGOP00005010472 | ENSEGOP00005014681 | QKI, KH domain containing RNA binding. | RRM domain-containing protein. | 0.815 |
RBFOX2 | ATXN1 | ENSEGOP00005013252 | ENSEGOP00005008821 | RNA binding fox-1 homolog 2. | AXH domain-containing protein. | 0.512 |
RBFOX2 | DV515_00006887 | ENSEGOP00005013252 | ENSEGOP00005014937 | RNA binding fox-1 homolog 2. | Uncharacterized protein. | 0.563 |
RBFOX2 | ELAVL1 | ENSEGOP00005013252 | ENSEGOP00005010880 | RNA binding fox-1 homolog 2. | ELAV-like protein; Belongs to the RRM elav family. | 0.501 |
RBFOX2 | HNRNPA2B1 | ENSEGOP00005013252 | ENSEGOP00005003331 | RNA binding fox-1 homolog 2. | Uncharacterized protein. | 0.510 |
RBFOX2 | QKI | ENSEGOP00005013252 | ENSEGOP00005010472 | RNA binding fox-1 homolog 2. | QKI, KH domain containing RNA binding. | 0.762 |
RBFOX2 | RBM24 | ENSEGOP00005013252 | ENSEGOP00005008818 | RNA binding fox-1 homolog 2. | RRM domain-containing protein. | 0.752 |
RBFOX2 | RBM38 | ENSEGOP00005013252 | ENSEGOP00005022979 | RNA binding fox-1 homolog 2. | Uncharacterized protein. | 0.739 |
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