STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG5PINc domain-containing protein. (1049 aa)    
Predicted Functional Partners:
SMG6
Uncharacterized protein.
   
0.947
ENSEGOP00005009933
annotation not available
   
 0.941
UPF3B
Smg4_UPF3 domain-containing protein.
   
 0.941
SMG7
SMG7 nonsense mediated mRNA decay factor.
   
0.908
SMG1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.840
NCBP1
MIF4G domain-containing protein.
     
 0.836
DV515_00012124
Uncharacterized protein.
     
 0.826
ENSEGOP00005021918
annotation not available
   
 0.826
ENSEGOP00005021922
annotation not available
   
 0.826
ENSEGOP00005022055
annotation not available
   
 0.826
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.