STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DV515_00006012CAP-ZIP_m domain-containing protein. (849 aa)    
Predicted Functional Partners:
ENSEGOP00005015632
annotation not available
 
      0.792
WASHC1
WH2 domain-containing protein.
    
 
 0.779
WASHC5
Uncharacterized protein.
   
 
 0.754
WASHC3
Uncharacterized protein.
    
 
 0.739
WASHC4
Uncharacterized protein.
   
 
 0.693
VPS35
Uncharacterized protein.
    
 
 0.641
SLF1
SMC5-SMC6 complex localization factor 1.
    
 
 0.592
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.569
FKBP15
Peptidylprolyl isomerase.
  
 
 
 0.511
CCDC93
KOG2701 domain-containing protein.
    
 
 0.415
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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