STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASTOR1Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
SEC13
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.969
MIOS
Zinc_ribbon_16 domain-containing protein.
    
 0.965
SEH1L
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
     
 0.963
WDR59
Uncharacterized protein.
    
 0.963
WDR24
WD_REPEATS_REGION domain-containing protein.
    
 0.961
DV515_00011342
Uncharacterized protein.
  
  
 
0.877
ENSEGOP00005015692
annotation not available
  
  
 
0.877
METTL25
Methyltranfer_dom domain-containing protein.
    
 0.710
NPRL3
Uncharacterized protein.
     
 0.646
PARP16
Poly [ADP-ribose] polymerase.
    
 0.537
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.