STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HGDUncharacterized protein. (441 aa)    
Predicted Functional Partners:
HPD
4-hydroxyphenylpyruvate dioxygenase.
  
 0.997
GSTZ1
Uncharacterized protein; Belongs to the GST superfamily.
 
 
 0.988
DV515_00004802
Uncharacterized protein.
  
 0.979
FAH
Uncharacterized protein.
  
 
 0.855
F13B
Coagulation factor XIII B chain.
   
  
 0.803
TAT
Tyrosine aminotransferase.
   
  
 0.756
AGXT2
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.740
PCBD2
Uncharacterized protein.
  
  
 0.722
PCBD1
Uncharacterized protein.
  
  
 0.722
FAHD1
FAA_hydrolase domain-containing protein.
  
 
 0.715
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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