STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DV515_00012087Uncharacterized protein. (77 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin-like domain-containing protein.
  
0.997
DV515_00004256
Ubiquitin-like domain-containing protein.
  
 
0.996
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.995
MYSM1
Uncharacterized protein.
    
 0.983
UBXN7
UBX domain protein 7.
    
 0.977
BIRC6
Uncharacterized protein.
   
 0.971
FANCM
Helicase C-terminal domain-containing protein.
   
 0.960
SCP2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.944
PINK1
Protein kinase domain-containing protein.
    
 0.943
TRIP12
Uncharacterized protein.
   
 0.939
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.