Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR8 | ENSEGOP00005020892 | ENSEGOP00005008367 | ENSEGOP00005020892 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | annotation not available | 0.597 |
CCNH | DV515_00009254 | ENSEGOP00005020607 | ENSEGOP00005014172 | CYCLIN domain-containing protein; Belongs to the cyclin family. | General transcription factor IIH subunit. | 0.989 |
CCNH | ENSEGOP00005020892 | ENSEGOP00005020607 | ENSEGOP00005020892 | CYCLIN domain-containing protein; Belongs to the cyclin family. | annotation not available | 0.573 |
CCNH | ERCC3 | ENSEGOP00005020607 | ENSEGOP00005006576 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.990 |
CCNH | GTF2H1 | ENSEGOP00005020607 | ENSEGOP00005004034 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.994 |
CCNH | GTF2H3 | ENSEGOP00005020607 | ENSEGOP00005022511 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.997 |
CCNH | POLR1A | ENSEGOP00005020607 | ENSEGOP00005001881 | CYCLIN domain-containing protein; Belongs to the cyclin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.666 |
CCNH | POLR1B | ENSEGOP00005020607 | ENSEGOP00005003676 | CYCLIN domain-containing protein; Belongs to the cyclin family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.822 |
DV515_00009254 | CCNH | ENSEGOP00005014172 | ENSEGOP00005020607 | General transcription factor IIH subunit. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.989 |
DV515_00009254 | ENSEGOP00005020892 | ENSEGOP00005014172 | ENSEGOP00005020892 | General transcription factor IIH subunit. | annotation not available | 0.589 |
DV515_00009254 | ERCC3 | ENSEGOP00005014172 | ENSEGOP00005006576 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.999 |
DV515_00009254 | GTF2H1 | ENSEGOP00005014172 | ENSEGOP00005004034 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.999 |
DV515_00009254 | GTF2H3 | ENSEGOP00005014172 | ENSEGOP00005022511 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.999 |
DV515_00009254 | POLR1A | ENSEGOP00005014172 | ENSEGOP00005001881 | General transcription factor IIH subunit. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.727 |
DV515_00009254 | POLR1B | ENSEGOP00005014172 | ENSEGOP00005003676 | General transcription factor IIH subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.895 |
ENSEGOP00005020892 | ACTR8 | ENSEGOP00005020892 | ENSEGOP00005008367 | annotation not available | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.597 |
ENSEGOP00005020892 | CCNH | ENSEGOP00005020892 | ENSEGOP00005020607 | annotation not available | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.573 |
ENSEGOP00005020892 | DV515_00009254 | ENSEGOP00005020892 | ENSEGOP00005014172 | annotation not available | General transcription factor IIH subunit. | 0.589 |
ENSEGOP00005020892 | ERCC3 | ENSEGOP00005020892 | ENSEGOP00005006576 | annotation not available | Uncharacterized protein. | 0.610 |
ENSEGOP00005020892 | GTF2H1 | ENSEGOP00005020892 | ENSEGOP00005004034 | annotation not available | Uncharacterized protein. | 0.627 |
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