STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1AAA domain-containing protein; Belongs to the AAA ATPase family. (362 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.959
ALDH18A1
Uncharacterized protein.
    
 0.857
ENSEGOP00005022122
annotation not available
    
 0.802
PEX3
Peroxisomal biogenesis factor 3.
     
 0.773
UFD1
Uncharacterized protein.
   
 0.765
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.754
PEX13
SH3 domain-containing protein.
    
 0.753
PEX14
Pex14_N domain-containing protein.
    
 0.733
ABCD3
Uncharacterized protein.
     
 0.716
PEX16
Peroxisomal membrane protein PEX16.
     
 0.713
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.