Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DV515_00004256 | DV515_00018060 | ENSEGOP00005003984 | ENSEGOP00005022233 | Ubiquitin-like domain-containing protein. | USP domain-containing protein. | 0.595 |
DV515_00004256 | IDE | ENSEGOP00005003984 | ENSEGOP00005010866 | Ubiquitin-like domain-containing protein. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.903 |
DV515_00004256 | MYSM1 | ENSEGOP00005003984 | ENSEGOP00005020128 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.983 |
DV515_00004256 | PCNA | ENSEGOP00005003984 | ENSEGOP00005016695 | Ubiquitin-like domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.959 |
DV515_00004256 | POLH | ENSEGOP00005003984 | ENSEGOP00005010397 | Ubiquitin-like domain-containing protein. | UmuC domain-containing protein. | 0.911 |
DV515_00004256 | POLK | ENSEGOP00005003984 | ENSEGOP00005006947 | Ubiquitin-like domain-containing protein. | UmuC domain-containing protein. | 0.710 |
DV515_00004256 | REV1 | ENSEGOP00005003984 | ENSEGOP00005010538 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.914 |
DV515_00004256 | RFC3 | ENSEGOP00005003984 | ENSEGOP00005002289 | Ubiquitin-like domain-containing protein. | AAA domain-containing protein. | 0.638 |
DV515_00004256 | RFC4 | ENSEGOP00005003984 | ENSEGOP00005006449 | Ubiquitin-like domain-containing protein. | AAA domain-containing protein. | 0.638 |
DV515_00004256 | USP10 | ENSEGOP00005003984 | ENSEGOP00005009016 | Ubiquitin-like domain-containing protein. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.643 |
DV515_00018060 | DV515_00004256 | ENSEGOP00005022233 | ENSEGOP00005003984 | USP domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.595 |
DV515_00018060 | IDE | ENSEGOP00005022233 | ENSEGOP00005010866 | USP domain-containing protein. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.601 |
DV515_00018060 | MYSM1 | ENSEGOP00005022233 | ENSEGOP00005020128 | USP domain-containing protein. | Uncharacterized protein. | 0.574 |
DV515_00018060 | PCNA | ENSEGOP00005022233 | ENSEGOP00005016695 | USP domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.604 |
DV515_00018060 | POLH | ENSEGOP00005022233 | ENSEGOP00005010397 | USP domain-containing protein. | UmuC domain-containing protein. | 0.589 |
DV515_00018060 | POLK | ENSEGOP00005022233 | ENSEGOP00005006947 | USP domain-containing protein. | UmuC domain-containing protein. | 0.557 |
DV515_00018060 | REV1 | ENSEGOP00005022233 | ENSEGOP00005010538 | USP domain-containing protein. | Uncharacterized protein. | 0.560 |
DV515_00018060 | RFC3 | ENSEGOP00005022233 | ENSEGOP00005002289 | USP domain-containing protein. | AAA domain-containing protein. | 0.556 |
DV515_00018060 | RFC4 | ENSEGOP00005022233 | ENSEGOP00005006449 | USP domain-containing protein. | AAA domain-containing protein. | 0.556 |
DV515_00018060 | USP10 | ENSEGOP00005022233 | ENSEGOP00005009016 | USP domain-containing protein. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.638 |
page 1 of 4