STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF6RING-type domain-containing protein. (331 aa)    
Predicted Functional Partners:
L3MBTL2
FCS-type domain-containing protein.
    
 0.948
RNF2
Ring finger protein 2.
   
 0.929
E2F6
E2F_TDP domain-containing protein.
    
 0.927
CBX3
Uncharacterized protein.
    
 0.919
RYBP
Uncharacterized protein.
    
 0.846
BCOR
ANK_REP_REGION domain-containing protein.
    
 0.845
YAF2
YY1 associated factor 2.
    
 0.838
TFDP1
Transcription factor.
    
 0.834
MAX
BHLH domain-containing protein.
    
 0.813
CBX2
Chromo domain-containing protein.
    
 0.803
Your Current Organism:
Erythrura gouldiae
NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.