STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104590008Secoisolariciresinol dehydrogenase-like. (285 aa)    
Predicted Functional Partners:
LOC104595633
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.689
LOC104605230
Putative acyl-activating enzyme 19 isoform X1.
  
 0.469
LOC104602515
Uncharacterized protein LOC104602515.
  
 
 0.447
LOC104591581
Very-long-chain 3-oxoacyl-CoA reductase 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.440
LOC104593003
Very-long-chain 3-oxoacyl-CoA reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.438
LOC104587903
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.430
LOC104592303
Photosynthetic NDH subunit of subcomplex B 3, chloroplastic.
   
 0.407
LOC104592109
Photosynthetic NDH subunit of subcomplex B 3, chloroplastic.
   
 0.407
LOC104611832
DNA-damage-repair/toleration protein DRT102.
  
 
 0.407
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.