STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104591453FKBP12-interacting protein of 37 kDa. (341 aa)    
Predicted Functional Partners:
LOC104594082
N6-adenosine-methyltransferase MT-A70-like; Belongs to the MT-A70-like family.
   
 0.989
LOC104596028
Methyltransferase-like protein 1; Belongs to the MT-A70-like family.
   
 0.984
LOC104590359
Uncharacterized protein LOC104590359.
    
 
 0.970
LOC104602840
E3 ubiquitin-protein ligase Hakai.
    
 
 0.952
LOC104607288
THO complex subunit 2 isoform X1.
    
 
 0.952
LOC104585866
30-kDa cleavage and polyadenylation specificity factor 30.
    
 
 0.861
LOC104608595
Peptidylprolyl isomerase.
    
 
 0.586
LOC104593486
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
      
 0.578
LOC104590148
Methyltransferase-like protein 2 isoform X1; Belongs to the MT-A70-like family.
      
 0.577
LOC104602243
YTH domain-containing protein 1 isoform X1.
    
 
 0.568
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.