STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104590789Syntaxin-81-like isoform X1. (311 aa)    
Predicted Functional Partners:
LOC104601523
Uncharacterized protein LOC104601523 isoform X1.
   
 0.990
LOC104589202
25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family.
   
 0.983
LOC104607259
25.3 kDa vesicle transport protein-like; Belongs to the synaptobrevin family.
   
 0.983
LOC104596116
25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family.
   
 0.979
LOC104602112
Uncharacterized protein LOC104602112.
    
 0.975
LOC104594124
Centromere/kinetochore protein zw10 homolog isoform X1.
    
 0.959
LOC104608113
MAG2-interacting protein 2 isoform X1.
    
 0.948
LOC104589808
Uncharacterized protein LOC104589808.
    
 0.944
LOC104590370
Syntaxin-81-like isoform X1.
  
  
 
0.900
LOC104604179
RINT1-like protein MAG2L isoform X1.
    
 0.893
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.