STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104591639Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)    
Predicted Functional Partners:
LOC104597191
Triosephosphate isomerase, cytosolic.
 
 0.982
LOC104602457
Triosephosphate isomerase, cytosolic.
 
 0.982
LOC104605197
Triosephosphate isomerase, chloroplastic isoform X1.
 
 0.981
LOC104605564
Triosephosphate isomerase, chloroplastic-like.
 
 0.981
LOC104606042
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.977
LOC104610834
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.977
LOC104595091
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.976
LOC104602251
Transketolase, chloroplastic.
  
 
 0.965
LOC104611478
Transketolase, chloroplastic.
  
 
 0.965
LOC104598575
Uncharacterized protein LOC104598575.
  
 
 0.949
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.