STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104590493Dihydropyrimidinase isoform X1. (553 aa)    
Predicted Functional Partners:
LOC104607306
Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic.
 
 0.997
LOC104595495
Beta-ureidopropionase.
 
 
 0.991
LOC104592016
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.959
LOC104609878
Vesicle transport protein GOT1-like.
  
 
 0.955
LOC104608808
Uridine 5'-monophosphate synthase.
  
  
 0.949
LOC104589753
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.882
LOC104589330
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.882
LOC104588044
Aspartate carbamoyltransferase 1, chloroplastic-like; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 0.881
LOC104588652
Carbamoyl-phosphate synthase large chain, chloroplastic-like.
  
 0.881
LOC104594765
Carbamoyl-phosphate synthase large chain, chloroplastic-like.
  
 0.881
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.