STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104587840Uncharacterized protein LOC104587840 isoform X1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (404 aa)    
Predicted Functional Partners:
LOC104595633
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.821
LOC104611993
Serine--glyoxylate aminotransferase.
  
 
 0.777
LOC104600737
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.702
LOC104603685
Uncharacterized protein LOC104603685 isoform X1.
    
  0.598
LOC104602274
Uncharacterized protein LOC104602274 isoform X1.
     
 0.596
LOC104604143
Phosphoserine aminotransferase.
     
 0.596
LOC109115766
D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like.
 
   
 0.558
LOC104596313
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.544
LOC104612856
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.544
LOC104600210
C-terminal binding protein AN-like.
 
   
 0.526
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.