STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104588363CAAX prenyl protease 2 isoform X1. (330 aa)    
Predicted Functional Partners:
LOC104600193
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.987
LOC104587193
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.986
LOC104587019
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.985
LOC104612300
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.953
LOC104600911
Isoprenylcysteine alpha-carbonyl methylesterase ICME-like.
     
 0.927
LOC104603088
Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 isoform X1.
     
 0.927
LOC104610287
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.745
LOC104604535
Dual specificity phosphatase Cdc25.
     
 0.731
LOC104591708
Uncharacterized protein LOC104591708 isoform X1.
    
 
 0.677
LOC104611885
Uncharacterized protein LOC104611885.
    
 
 0.677
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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