STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104591763UDP-arabinopyranose mutase 1-like. (369 aa)    
Predicted Functional Partners:
LOC104606683
UDP-sugar pyrophosphorylase.
     
 0.903
LOC104598365
Probable UDP-arabinose 4-epimerase 2.
     
 0.902
LOC104599561
Actin-related protein 4; Belongs to the actin family.
    
 0.825
LOC104589478
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.818
LOC104592820
Actin-related protein 2 isoform X1; Belongs to the actin family.
 
  
 0.818
LOC104610054
Actin-related protein 9; Belongs to the actin family.
    
 0.810
LOC104587785
Actin-interacting protein 1-2-like.
   
 0.791
LOC104599825
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.786
LOC104590239
Chromatin structure-remodeling complex protein SYD isoform X1.
    
 0.772
LOC104587251
Embryonic protein DC-8-like.
   
 0.769
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.