STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104593537Vacuolar protein sorting-associated protein 26A-like. (301 aa)    
Predicted Functional Partners:
LOC104586763
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.981
LOC104601540
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.981
LOC104604252
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.975
LOC104603625
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.975
LOC104603628
Splicing regulatory glutamine/lysine-rich protein 1 isoform X1.
   
 0.949
LOC104604255
Glutamic acid-rich protein-like isoform X1.
   
 0.949
LOC104609106
Vacuolar protein sorting-associated protein 26A.
  
  
 
0.900
LOC104611733
TBC1 domain family member 5 homolog B-like.
   
 
 0.801
LOC104592356
Photosystem II stability/assembly factor HCF136, chloroplastic.
    
 
 0.774
LOC104589207
Sorting nexin 1.
    
 
 0.651
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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