STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104592852Gamma carbonic anhydrase-like 2, mitochondrial. (243 aa)    
Predicted Functional Partners:
LOC104591996
Uncharacterized protein LOC104591996.
   
 
 0.848
LOC104597526
Outer envelope pore protein 16-3, chloroplastic/mitochondrial.
    
 
 0.821
LOC104589562
Uncharacterized protein LOC104589562.
   
 
 0.804
LOC104607307
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial; Belongs to the complex I 75 kDa subunit family.
    
 
 0.789
LOC104599199
Uncharacterized protein LOC104599199.
   
   0.771
LOC104599792
Uncharacterized protein LOC104599792.
    
   0.771
LOC104602741
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.
  
   0.770
LOC104587243
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.764
LOC104609876
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.764
LOC104596128
Uncharacterized protein LOC104596128.
   
   0.763
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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