STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104591180LOW QUALITY PROTEIN: acetolactate synthase 1, chloroplastic-like. (431 aa)    
Predicted Functional Partners:
LOC104586808
Acetolactate synthase small subunit 2, chloroplastic-like.
 
 0.999
LOC104608577
Acetolactate synthase, chloroplastic-like.
 
  
  0.994
LOC104587183
Threonine dehydratase.
  
 0.979
LOC104605687
Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.
 
 
 0.979
LOC104612146
Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.
 
 
 0.979
LOC104588498
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.977
LOC104608502
Acetolactate synthase 3, chloroplastic-like.
 
  
 
0.961
LOC104610141
2-isopropylmalate synthase A-like.
 
 
 0.943
LOC104587899
Dihydroxy-acid dehydratase, chloroplastic.
  
 0.921
LOC104590669
NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like.
  
 
 0.902
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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