STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LOC104594597Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. (469 aa)    
Predicted Functional Partners:
LOC104595496
Argininosuccinate lyase, chloroplastic.
 
  
 0.999
LOC104602394
Acetylglutamate kinase, chloroplastic isoform X1.
 
 0.999
LOC104608189
Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic.
 
 
 0.999
LOC104610467
Argininosuccinate synthase, chloroplastic.
  
  
 0.999
LOC104608575
Probable amino-acid acetyltransferase NAGS1, chloroplastic isoform X1.
  
 
 0.998
LOC104591846
Acetylornithine aminotransferase, mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.994
LOC104613394
Acetylornithine aminotransferase, mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.994
LOC104595651
Ornithine carbamoyltransferase, chloroplastic-like; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.990
LOC104606478
Acetylornithine deacetylase-like.
  
 
 0.972
LOC104606852
Aminoacylase-1.
  
 
 0.972
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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