STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104592149Cyclin-dependent kinase F-1-like; Belongs to the protein kinase superfamily. (470 aa)    
Predicted Functional Partners:
LOC104606100
Wee1-like protein kinase; Belongs to the protein kinase superfamily.
   
0.870
LOC104604535
Dual specificity phosphatase Cdc25.
   
 0.854
LOC104610589
Origin of replication complex subunit 2.
   
 0.852
LOC104586197
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.849
LOC104604585
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.849
LOC104601234
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.823
LOC104604322
Serine/threonine-protein kinase ATR isoform X1; Belongs to the PI3/PI4-kinase family.
   
 0.823
LOC104609927
Cell division control protein 6 homolog B-like isoform X1.
   
 0.823
LOC104609746
Anaphase-promoting complex subunit 6.
    
 0.793
LOC104594929
Anaphase-promoting complex subunit 1.
    
 0.788
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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