STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104592306Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (376 aa)    
Predicted Functional Partners:
LOC104608354
Gibberellin 20 oxidase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.933
LOC104596232
Gibberellin 20 oxidase 1-D-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.932
LOC104607060
Gibberellin 2-beta-dioxygenase 2-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.748
LOC104611218
Gibberellin 2-beta-dioxygenase 2-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.747
LOC104610036
Gibberellin 2-beta-dioxygenase-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.745
LOC104613494
Gibberellin 2-beta-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.741
LOC104604990
Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.703
LOC104595000
Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.702
LOC104585673
Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.701
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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