STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104592566Receptor-like protein 12 isoform X1. (1254 aa)    
Predicted Functional Partners:
LOC104587827
Small glutamine-rich tetratricopeptide repeat-containing protein.
    
 
 0.598
LOC104589899
Probable rRNA-processing protein EBP2 homolog.
      
 0.593
LOC104598259
Zinc finger protein ZPR1 homolog.
      
 0.593
LOC104598378
Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family.
    
 0.584
LOC104601196
Aspartyl protease family protein 2; Belongs to the peptidase A1 family.
      
 0.563
LOC104603051
Aspartic proteinase nepenthesin-1-like; Belongs to the peptidase A1 family.
      
 0.563
LOC104603014
Protein ASPARTIC PROTEASE IN GUARD CELL 1; Belongs to the peptidase A1 family.
      
 0.563
LOC104598294
CMP-sialic acid transporter 4-like.
      
 0.561
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.