STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104596699Protein ABHD11. (409 aa)    
Predicted Functional Partners:
atpA
ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
 0.605
LOC104605230
Putative acyl-activating enzyme 19 isoform X1.
    
 0.523
LOC104586476
Lysine-specific demethylase JMJ25.
      
 0.489
LOC104585815
Uncharacterized protein LOC104585815.
      
 0.489
LOC104593592
Uncharacterized protein LOC104593592.
      
 0.489
LOC104595133
Uncharacterized protein LOC104595133 isoform X1.
      
 0.489
LOC104603339
Uncharacterized protein LOC104603339.
      
 0.489
LOC104598456
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.486
LOC104586235
Uncharacterized protein LOC104586235 isoform X1.
    
 
 0.485
LOC104601188
OTU domain-containing protein At3g57810 isoform X1.
      
 0.482
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (26%) [HD]