STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104597262Phagocyte signaling-impaired protein isoform X1. (1013 aa)    
Predicted Functional Partners:
LOC104611944
N-alpha-acetyltransferase 20.
    
 0.963
LOC104596517
Uncharacterized protein LOC104596517.
    
 
 0.908
LOC104611862
Uncharacterized protein LOC104611862.
    
 
 0.908
LOC104592748
N-alpha-acetyltransferase MAK3.
     
 0.787
LOC104606313
N-alpha-acetyltransferase 11-like.
     
 0.787
LOC104613409
N-alpha-acetyltransferase daf-31-like.
     
 0.787
LOC104599172
Uncharacterized protein LOC104599172.
   
 
 0.769
LOC104611705
Uncharacterized protein LOC104611705.
   
 
 0.769
LOC104592337
N-alpha-acetyltransferase 50-like.
   
 
 0.751
LOC104595306
N-alpha-acetyltransferase 50.
   
 
 0.751
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.