STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104594042Mitogen-activated protein kinase kinase kinase 2-like; Belongs to the protein kinase superfamily. (476 aa)    
Predicted Functional Partners:
LOC104593082
Protein NBR1 homolog.
    
 0.506
LOC104588609
Mitogen-activated protein kinase kinase 10-like; Belongs to the protein kinase superfamily.
  
0.446
LOC104603135
Mitogen-activated protein kinase kinase 5-like; Belongs to the protein kinase superfamily.
  
0.441
LOC104600642
Mitogen-activated protein kinase kinase 2-like; Belongs to the protein kinase superfamily.
  
0.437
LOC104592034
Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
  
0.436
LOC104604852
Septum-promoting GTP-binding protein 1-like.
    
 0.431
LOC104610880
Septum-promoting GTP-binding protein 1.
    
 0.431
LOC104606068
Probable serine/threonine-protein kinase At1g01540; Belongs to the protein kinase superfamily.
  
 
  0.429
LOC104599444
Serine/threonine-protein kinase 4-like isoform X1.
  
 
0.426
LOC104608172
Germinal center kinase 1-like isoform X1.
  
 
0.426
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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