STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104599821Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (418 aa)    
Predicted Functional Partners:
LOC104604302
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.993
LOC104610937
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.993
LOC104612799
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.993
LOC104599289
2-oxoglutarate dehydrogenase, mitochondrial-like.
   
 
 0.984
LOC104602773
2-oxoglutarate dehydrogenase, mitochondrial-like.
   
 
 0.984
LOC104611994
2-oxoglutarate dehydrogenase, mitochondrial-like.
   
 
 0.984
LOC104608852
2-oxoglutarate dehydrogenase, mitochondrial-like isoform X1.
   
 
 0.984
LOC104593346
Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial-like.
  
 0.973
LOC104599192
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-like.
  
 0.973
LOC104603177
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial isoform X1.
  
 0.973
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.