STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104599529Protein STAY-GREEN LIKE, chloroplastic isoform X1. (253 aa)    
Predicted Functional Partners:
LOC104587818
Chlorophyllide a oxygenase, chloroplastic-like isoform X1.
     
 0.927
LOC104587061
Chlorophyllide a oxygenase, chloroplastic isoform X1.
     
 0.927
LOC104596219
Protein STAY-GREEN 1, chloroplastic-like.
  
  
 
0.904
LOC104608345
Protein STAY-GREEN 1, chloroplastic-like isoform X1.
  
  
 
0.904
LOC104587634
7-hydroxymethyl chlorophyll a reductase, chloroplastic.
     
 0.903
LOC104586453
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
     
  0.900
LOC104585991
Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic.
     
  0.900
LOC104588887
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
     
  0.900
LOC104594932
Chlorophyll synthase, chloroplastic isoform X1.
     
  0.900
LOC104596611
Chlorophyllase-2, chloroplastic isoform X1.
     
  0.900
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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