STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104596479RAN GTPase-activating protein 2. (542 aa)    
Predicted Functional Partners:
LOC104601719
SUMO-conjugating enzyme SCE1-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.949
LOC104606930
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.949
LOC104592351
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.943
LOC104595326
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.943
LOC104611155
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.943
LOC104612211
RAN GTPase-activating protein 2-like.
  
  
 
0.901
LOC104607410
Nuclear pore complex protein NUP155.
   
 0.871
LOC104600493
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.863
LOC104592259
Nuclear pore complex protein NUP50A-like.
   
 0.854
LOC104590398
Ran-binding protein 1 homolog b-like.
   
 0.854
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (30%) [HD]