STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104601041Oxysterol-binding protein-related protein 3A-like isoform X1; Belongs to the OSBP family. (456 aa)    
Predicted Functional Partners:
LOC104612804
tRNA wybutosine-synthesizing protein 2/3/4 isoform X1.
      
 0.482
LOC104598535
Vesicle-associated protein 1-2.
    
 0.448
LOC104602329
Vesicle-associated protein 1-1-like.
    
 0.448
LOC104588930
Vesicle-associated protein 1-1-like.
    
 0.423
LOC104598563
Vesicle-associated protein 1-3-like.
    
 0.423
LOC104598408
Vesicle-associated protein 2-1-like.
    
 0.423
LOC104602305
Vesicle-associated protein 1-3-like.
    
 0.423
LOC104605701
Vesicle-associated protein 4-1.
    
 0.423
LOC104612260
Vesicle-associated protein 4-1.
    
 0.423
LOC104610518
Vesicle-associated protein 2-1-like isoform X1.
    
 0.423
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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