STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104597527Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (855 aa)    
Predicted Functional Partners:
LOC104596509
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
 
 
0.907
LOC104611974
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
 
 
0.907
LOC104595823
Allene oxide synthase 1, chloroplastic-like; Belongs to the cytochrome P450 family.
   
 
 0.763
LOC104601989
Allene oxide synthase-like; Belongs to the cytochrome P450 family.
   
 
 0.763
LOC104587776
Alpha-dioxygenase 2.
    
 0.702
LOC104595421
Alpha-dioxygenase 1-like.
    
 0.702
LOC104595431
Alpha-dioxygenase 1-like.
    
 0.702
LOC104595821
Allene oxide synthase 1, chloroplastic-like; Belongs to the cytochrome P450 family.
   
 
 0.676
LOC104595959
Allene oxide synthase 1, chloroplastic-like.
   
 
 0.676
LOC104598692
Phospholipase A(1) DAD1, chloroplastic-like.
     
 0.668
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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