STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104597374Insulin-degrading enzyme-like 1, peroxisomal; Belongs to the peptidase M16 family. (967 aa)    
Predicted Functional Partners:
LOC104607638
ubiquitin-60S ribosomal protein L40.
    
  0.791
LOC104593164
ubiquitin-40S ribosomal protein S27a-like.
    
  0.617
LOC104591414
ubiquitin-40S ribosomal protein S27a.
    
  0.617
LOC104607105
ubiquitin-40S ribosomal protein S27a-like.
    
  0.617
LOC104607103
ubiquitin-40S ribosomal protein S27a-like.
    
  0.617
LOC104593765
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
 
 
    0.519
LOC104613342
2-hydroxyacyl-CoA lyase; Belongs to the TPP enzyme family.
     
 0.498
LOC104599242
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.487
LOC104605874
Presequence protease 2, chloroplastic/mitochondrial.
    
 
 0.485
LOC104604649
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
 
 
    0.476
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.