STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104597850Uncharacterized protein LOC104597850. (1217 aa)    
Predicted Functional Partners:
LOC104592296
Tudor domain-containing protein 3.
    
 0.976
LOC104608879
Crossover junction endonuclease MUS81 isoform X1.
    
 0.913
LOC104609450
DNA repair protein RAD50.
  
 0.890
LOC104600508
Replication protein A 32 kDa subunit A.
    
 0.888
LOC104596846
ATP-dependent DNA helicase mph1 isoform X1.
   
 
 0.887
LOC104606378
Uncharacterized protein LOC104606378.
    
 0.876
LOC104609823
Uncharacterized protein LOC104609823.
    
 0.876
LOC104609822
DNA repair endonuclease UVH1 isoform X1.
    
 0.876
LOC104599148
DNA repair protein XRCC3 homolog.
  
 0.850
LOC104591653
ATP-dependent DNA helicase Q-like 5 isoform X1.
  
 0.844
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.