STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104597720Enhancer of polycomb-like protein. (453 aa)    
Predicted Functional Partners:
LOC104605324
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
    
 0.965
LOC104586109
SWR1-complex protein 4.
    
 0.964
LOC104599561
Actin-related protein 4; Belongs to the actin family.
    
 0.951
LOC104600869
Chromatin modification-related protein MEAF6.
    
 0.921
LOC104607296
Protein MRG1.
   
 0.889
LOC104608737
RuvB-like helicase; Belongs to the RuvB family.
    
 0.869
LOC104587055
Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1.
    
 0.843
LOC104589302
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.838
LOC104600031
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.838
LOC104589700
Transcription initiation factor TFIID subunit 14b-like isoform X1.
    
 0.829
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.