STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104600399Plastidal glycolate/glycerate translocator 1, chloroplastic. (525 aa)    
Predicted Functional Partners:
LOC104603640
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.532
LOC104591654
Malate synthase; Belongs to the malate synthase family.
     
 0.523
LOC104597004
Sedoheptulose-1,7-bisphosphatase, chloroplastic.
   
    0.489
LOC104601473
D-lactate dehydrogenase [cytochrome], mitochondrial isoform X1.
     
 0.449
LOC104603275
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic.
   
    0.443
LOC104596477
Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic.
   
    0.414
LOC104611868
Probable sodium/metabolite cotransporter BASS5, chloroplastic isoform X1.
      
 0.412
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.