STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104598725Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1125 aa)    
Predicted Functional Partners:
LOC104589805
Heat shock cognate protein 80.
   
 
 0.570
LOC104594303
Heat shock cognate protein 80-like.
   
 
 0.570
LOC104611516
Heat shock protein 83-like.
   
 
 0.570
LOC104600195
Heat shock protein 83.
   
 
 0.417
LOC104604158
Uncharacterized protein LOC104604158; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.407
LOC104599233
Calcium-transporting ATPase 4, endoplasmic reticulum-type-like; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.404
LOC104594684
Calcium-transporting ATPase 4, endoplasmic reticulum-type-like; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.403
LOC104594133
Calcium-transporting ATPase, endoplasmic reticulum-type-like; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.403
LOC104604709
Calcium-transporting ATPase, endoplasmic reticulum-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.403
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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