STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104599007acyl-CoA-binding domain-containing protein 4 isoform X1. (591 aa)    
Predicted Functional Partners:
LOC104591702
UPF0235 protein At5g63440-like isoform X1.
    
   0.839
LOC104592911
UPF0235 protein At5g63440 isoform X1.
    
   0.839
LOC104598456
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.646
LOC104588116
Cysteine proteinase RD21A-like; Belongs to the peptidase C1 family.
    
   0.636
LOC104607025
Cysteine proteinase RD21A-like; Belongs to the peptidase C1 family.
    
   0.636
LOC104607565
Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family.
    
   0.636
LOC104611580
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
    
   0.636
LOC104611572
ervatamin-B-like; Belongs to the peptidase C1 family.
    
   0.636
LOC104613133
Histone-lysine N-methyltransferase SETD1B-like; Belongs to the peptidase C1 family.
    
   0.636
LOC104592147
Rac-like GTP-binding protein ARAC7.
   
 0.633
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.